Parametrizing multicore architectures for multiple sequence alignment

Keyphrases

• Multiple Sequence Alignment 100%
• Multicore Architecture 100%
• Number of Cores 66%
• Popular 33%
• Bioinformatics 33%
• Hardware Resources 33%
• Biological Data 33%
• Impact Performance 33%
• Multicore 33%
• Sequence Alignment 33%
• ClustalW 33%
• Exponential Growth 33%
• Task Parallelism 33%
• High Performance Computing Systems 33%
• Computational Complexity of Algorithm 33%
• Memory Traffic 33%
• Memory Latency 33%
• Hardware Queue 33%
• Data Transfer 33%
• General Purpose Processor 33%
• Task Synchronization 33%
• Maximum Performance 33%
• Core Performance 33%
• Cache Configuration 33%
• Load Balancing Algorithm 33%
• Performance Gap 33%
• Increased Performance 33%
• Performance Scalability 33%

Computer Science

• Sequence Alignment 100%
• Multicore 100%
• Bioinformatics 25%
• Deep Understanding 25%
• Computer Hardware 25%
• Hardware Resource 25%
• High-Performance Computing 25%
• Load Balancing 25%
• Performance Impact 25%
• Computational Complexity 25%
• Exponential Growth 25%
• Computation-To-Communication Ratio 25%
• Memory Traffic 25%
• Target Application 25%
• Memory Latency 25%
• Cache Configuration 25%
• Task-Level Parallelism 25%
• General Purpose Processor 25%
• Performance Gap 25%